КФУ. Карточка публикации. The implementation of growth guidance factor diffusion via octree spatial structures for neuronal systems simulation

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THE IMPLEMENTATION OF GROWTH GUIDANCE FACTOR DIFFUSION VIA OCTREE SPATIAL STRUCTURES FOR NEURONAL SYSTEMS SIMULATION

Форма представления

Статьи в зарубежных журналах и сборниках

Год публикации

2018

Язык

английский

Авторы, сотрудники КФУ

Абрамов Виталий Денисович, автор

Гафаров Фаиль Мубаракович, автор

Кугуракова Влада Владимировна, автор

Авторы, студенты КФУ

Сабитов Алмаз Раушанович, автор

Библиографическое описание на языке оригинала

Sabitov A, Gafarov F, Kugurakova V, Abramov D, The implementation of growth guidance factor diffusion via octree spatial structures for neuronal systems simulation // Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). - 2018. - Vol.10745 LNCS, Is.. - P.158-163.

Аннотация

The BioDynaMo project was created in CERN OpenLab V and aims to become a general platform for computer simulations for biological research. Important development stage was the code modernization by changing the architecture in a way to utilize multiple levels of parallelism offered by todays hardware. Individual neurons are implemented as spherical (for the soma) and cylindrical (for neurites) elements that have appropriate mechanical properties. The extracellular space is discretized, and allows for the diffusion of extracellular signaling molecules, as well as the physical interactions of the many developing neurons. This paper describes methods of the real-time growing brain dynamics simulation for BioDynaMo project, a specially the implementation of growth guidance factor diffusion via octree spatial structures. ? Springer International Publishing AG 2018.

Ключевые слова

Biodynamo, Diffusion, Growth guidance factor, Neuronal systems, simulation, Octree, Octree spatial structures

Название журнала

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

URL

https://www.scopus.com/inward/record.uri?eid=2-s2.0-85042066461&doi=10.1007%2f978-3-319-74521-3_18&partnerID=40&md5=6b6e96f456b0333f5f05fdbc5acedefe

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https://repository.kpfu.ru/?p_id=176017

Полная запись метаданных

Поле DC	Значение	Язык
dc.contributor.author	Абрамов Виталий Денисович	ru_RU
dc.contributor.author	Гафаров Фаиль Мубаракович	ru_RU
dc.contributor.author	Кугуракова Влада Владимировна	ru_RU
dc.contributor.author	Сабитов Алмаз Раушанович	ru_RU
dc.date.accessioned	2018-01-01T00:00:00Z	ru_RU
dc.date.available	2018-01-01T00:00:00Z	ru_RU
dc.date.issued	2018	ru_RU
dc.identifier.citation	Sabitov A, Gafarov F, Kugurakova V, Abramov D, The implementation of growth guidance factor diffusion via octree spatial structures for neuronal systems simulation // Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). - 2018. - Vol.10745 LNCS, Is.. - P.158-163.	ru_RU
dc.identifier.uri	https://repository.kpfu.ru/?p_id=176017	ru_RU
dc.description.abstract	Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)	ru_RU
dc.description.abstract	The BioDynaMo project was created in CERN OpenLab V and aims to become a general platform for computer simulations for biological research. Important development stage was the code modernization by changing the architecture in a way to utilize multiple levels of parallelism offered by todays hardware. Individual neurons are implemented as spherical (for the soma) and cylindrical (for neurites) elements that have appropriate mechanical properties. The extracellular space is discretized, and allows for the diffusion of extracellular signaling molecules, as well as the physical interactions of the many developing neurons. This paper describes methods of the real-time growing brain dynamics simulation for BioDynaMo project, a specially the implementation of growth guidance factor diffusion via octree spatial structures. ? Springer International Publishing AG 2018.	ru_RU
dc.language.iso	ru	ru_RU
dc.subject	Biodynamo	ru_RU
dc.subject	Diffusion	ru_RU
dc.subject	Growth guidance factor	ru_RU
dc.subject	Neuronal systems	ru_RU
dc.subject	simulation	ru_RU
dc.subject	Octree	ru_RU
dc.subject	Octree spatial structures	ru_RU
dc.title	The implementation of growth guidance factor diffusion via octree spatial structures for neuronal systems simulation	ru_RU
dc.type	Статьи в зарубежных журналах и сборниках	ru_RU