КФУ. Карточка публикации. Comparative genome sequencing reveals genomic signature of extreme desiccation tolerance in the anhydrobiotic midge

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COMPARATIVE GENOME SEQUENCING REVEALS GENOMIC SIGNATURE OF EXTREME DESICCATION TOLERANCE IN THE ANHYDROBIOTIC MIDGE

Форма представления

Статьи в российских журналах и сборниках

Год публикации

2014

Авторы, сотрудники КФУ

Гусев Олег Александрович, автор

Другие авторы

Oleg Gusev, Yoshitaka Suetsugu, Richard Cornette, Takeshi Kawashima, Maria D. Logacheva, Alexey S. Kondrashov, Aleksey A. Penin, Rie Hatanaka, Shingo Kikuta, Sachiko Shimura, Hiroyuki Kanamori, Yuichi Katayose, Takashi Matsumoto, Elena Shagimardanova, Dmitry Alexeev, Vadim Govorun, Jennifer Wisecaver, Alexander Mikheyev, Ryo Koyanagi, Manabu Fujie, Tomoaki Nishiyama, Shuji Shigenobu, Tomoko F. Shibata, Veronika Golygina, Mitsuyasu Hasebe, Takashi Okuda, Nori Satoh & Takahiro Kikawada

Библиографическое описание на языке оригинала

Comparative genome sequencing reveals genomic signature of extreme desiccation tolerance in the anhydrobiotic midge

Аннотация

Anhydrobiosis represents an extreme example of tolerance adaptation to water loss, where an organism can survive in an ametabolic state until water returns. Here we report the first comparative analysis examining the genomic background of extreme desiccation tolerance, which is exclusively found in larvae of the only anhydrobiotic insect, Polypedilum vanderplanki. We compare the genomes of P. vanderplanki and a congeneric desiccation-sensitive midge P. nubifer. We determine that the genome of the anhydrobiotic species specifically contains clusters of multi-copy genes with products that act as molecular shields. In addition, the genome possesses several groups of genes with high similarity to known protective proteins. However, these genes are located in distinct paralogous clusters in the genome apart from the classical orthologues of the corresponding genes shared by both chironomids and other insects. The transcripts of these clustered paralogues contribute to a large majority of

Ключевые слова

anhydrobiosis, chironomids, desiccation

Название журнала

Nature Communications

URL

http://www.nature.com/ncomms/2014/140912/ncomms5784/full/ncomms5784.html

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https://repository.kpfu.ru/?p_id=91826

Полная запись метаданных

Поле DC	Значение	Язык
dc.contributor.author	Гусев Олег Александрович	ru_RU
dc.date.accessioned	2014-01-01T00:00:00Z	ru_RU
dc.date.available	2014-01-01T00:00:00Z	ru_RU
dc.date.issued	2014	ru_RU
dc.identifier.citation	Comparative genome sequencing reveals genomic signature of extreme desiccation tolerance in the anhydrobiotic midge	ru_RU
dc.identifier.uri	https://repository.kpfu.ru/?p_id=91826	ru_RU
dc.description.abstract	Nature Communications	ru_RU
dc.description.abstract	Anhydrobiosis represents an extreme example of tolerance adaptation to water loss, where an organism can survive in an ametabolic state until water returns. Here we report the first comparative analysis examining the genomic background of extreme desiccation tolerance, which is exclusively found in larvae of the only anhydrobiotic insect, Polypedilum vanderplanki. We compare the genomes of P. vanderplanki and a congeneric desiccation-sensitive midge P. nubifer. We determine that the genome of the anhydrobiotic species specifically contains clusters of multi-copy genes with products that act as molecular shields. In addition, the genome possesses several groups of genes with high similarity to known protective proteins. However, these genes are located in distinct paralogous clusters in the genome apart from the classical orthologues of the corresponding genes shared by both chironomids and other insects. The transcripts of these clustered paralogues contribute to a large majority of	ru_RU
dc.language.iso	ru	ru_RU
dc.subject	anhydrobiosis	ru_RU
dc.subject	chironomids	ru_RU
dc.subject	desiccation	ru_RU
dc.title	Comparative genome sequencing reveals genomic signature of extreme desiccation tolerance in the anhydrobiotic midge	ru_RU
dc.type	Статьи в российских журналах и сборниках	ru_RU