| Форма представления | Статьи в зарубежных журналах и сборниках |
| Год публикации | 2019 |
| Язык | английский |
|
Гоголев Юрий Викторович, автор
Гоголева Наталья Евгеньевна, автор
Горшков Владимир Юрьевич, автор
|
|
Белимов Андрей Алексеевич, автор
Исмаилов Тимур Толятович, автор
Николайчик Евгений Артурович, автор
Сафронова Вера Игоревна, автор
|
| Библиографическое описание на языке оригинала |
Gogoleva N.E., Nikolaichik Y.A., Ismailov T.T., Gorshkov V.Y., Safronova V.I., Belimov A.A., Gogolev Y.V. Complete genome sequence of the abscisic acid-utilizing strain Novosphingobium sp. P6W // 3 Biotech. – 2019. – 9(94) |
| Аннотация |
The phytohormone abscisic acid (ABA) plays multiple roles in plant survival and fitness. Significant quantities of ABA are constantly introduced into soil via root exudation, root turnover and incorporation of abscised shoot tissues. In addition, some phytopathogenic fungi synthesize ABA in the course of plant-microbe interactions. The accumulation of soil ABA can inhibit seed germination and root growth but despite this observation, the biochemical pathways of ABA conversion by microorganisms and genetic determinants of the process remain unknown. Here we report on the complete genome sequence of strain P6W, an ABA-utilizing isolate of the genus Novosphingobium. Strain P6W was isolated from the rhizosphere of rice (Oryza sativa L.) seedlings using a selective ABA-supplemented medium. The genome of strain P6W consists of 6,606,532 bp, which includes two chromosomes and two plasmids. It comprises of 5663 protein-coding genes and 80 RNA genes. ANI values calculated based on the analysis of nine previously sequenced genomes of members of the genus Novosphingobium ranged from 77 to 92 %, which suggests that strain P6W is potentially a new species of the genus Novosphingobium. Functional annotation of genes in the genome of strain P6W revealed a number genes that could be potentially responsible for ABA degradation. |
| Ключевые слова |
Abscisic acid, Novosphingobium, complete genome sequence, rhizosphere, plant-microbe interactions |
| Название журнала |
3 Biotech
|
| Ссылка для РПД |
http://dspace.kpfu.ru/xmlui/bitstream/handle/net/150867/F_Biotech_19.pdf?sequence=1&isAllowed=y
|
| URL |
https://doi.org/10.1007/s13205-019-1625-8 |
| Пожалуйста, используйте этот идентификатор, чтобы цитировать или ссылаться на эту карточку |
https://repository.kpfu.ru/?p_id=202698 |
| Файлы ресурса | |
|
|
Полная запись метаданных  |
| Поле DC |
Значение |
Язык |
| dc.contributor.author |
Гоголев Юрий Викторович |
ru_RU |
| dc.contributor.author |
Гоголева Наталья Евгеньевна |
ru_RU |
| dc.contributor.author |
Горшков Владимир Юрьевич |
ru_RU |
| dc.contributor.author |
Белимов Андрей Алексеевич |
ru_RU |
| dc.contributor.author |
Исмаилов Тимур Толятович |
ru_RU |
| dc.contributor.author |
Николайчик Евгений Артурович |
ru_RU |
| dc.contributor.author |
Сафронова Вера Игоревна |
ru_RU |
| dc.date.accessioned |
2019-01-01T00:00:00Z |
ru_RU |
| dc.date.available |
2019-01-01T00:00:00Z |
ru_RU |
| dc.date.issued |
2019 |
ru_RU |
| dc.identifier.citation |
Gogoleva N.E., Nikolaichik Y.A., Ismailov T.T., Gorshkov V.Y., Safronova V.I., Belimov A.A., Gogolev Y.V. Complete genome sequence of the abscisic acid-utilizing strain Novosphingobium sp. P6W // 3 Biotech. – 2019. – 9(94) |
ru_RU |
| dc.identifier.uri |
https://repository.kpfu.ru/?p_id=202698 |
ru_RU |
| dc.description.abstract |
3 Biotech |
ru_RU |
| dc.description.abstract |
The phytohormone abscisic acid (ABA) plays multiple roles in plant survival and fitness. Significant quantities of ABA are constantly introduced into soil via root exudation, root turnover and incorporation of abscised shoot tissues. In addition, some phytopathogenic fungi synthesize ABA in the course of plant-microbe interactions. The accumulation of soil ABA can inhibit seed germination and root growth but despite this observation, the biochemical pathways of ABA conversion by microorganisms and genetic determinants of the process remain unknown. Here we report on the complete genome sequence of strain P6W, an ABA-utilizing isolate of the genus Novosphingobium. Strain P6W was isolated from the rhizosphere of rice (Oryza sativa L.) seedlings using a selective ABA-supplemented medium. The genome of strain P6W consists of 6,606,532 bp, which includes two chromosomes and two plasmids. It comprises of 5663 protein-coding genes and 80 RNA genes. ANI values calculated based on the analysis of nine previously sequenced genomes of members of the genus Novosphingobium ranged from 77 to 92 %, which suggests that strain P6W is potentially a new species of the genus Novosphingobium. Functional annotation of genes in the genome of strain P6W revealed a number genes that could be potentially responsible for ABA degradation. |
ru_RU |
| dc.language.iso |
ru |
ru_RU |
| dc.subject |
Abscisic acid |
ru_RU |
| dc.subject |
Novosphingobium |
ru_RU |
| dc.subject |
complete genome sequence |
ru_RU |
| dc.subject |
rhizosphere |
ru_RU |
| dc.subject |
plant-microbe interactions |
ru_RU |
| dc.title |
Complete genome sequence of the abscisic acid-utilizing strain Novosphingobium sp. P6W |
ru_RU |
| dc.type |
Статьи в зарубежных журналах и сборниках |
ru_RU |
|
EN 
中文 
ES 
Карта сайта
