КФУ. Карточка публикации. Delimitation of the tick-borne flaviviruses. Resolving the tick-borne encephalitis virus and louping-ill virus paraphyletic taxa

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DELIMITATION OF THE TICK-BORNE FLAVIVIRUSES. RESOLVING THE TICK-BORNE ENCEPHALITIS VIRUS AND LOUPING-ILL VIRUS PARAPHYLETIC TAXA

Форма представления

Статьи в зарубежных журналах и сборниках

Год публикации

2022

Язык

английский

Авторы, сотрудники КФУ

Ткачев Сергей Евгеньевич, автор

Библиографическое описание на языке оригинала

Bondaryuk et al., 2022. Delimitation of the tick-borne flaviviruses. Resolving the tick-borne encephalitis virus and louping-ill virus paraphyletic taxa // Molecular Phylogenetics and Evolution, ISSN: 1055-7903, Vol: 169, Page: 107411

Аннотация

he tick-borne flavivirus (TBFV) group contains at least 12 members where five of them are important pathogens of humans inducing diseases with varying severity (from mild fever forms to acute encephalitis). The taxonomy structure of TBFV is not fully clarified at present. In particular, there is a number of paraphyletic issues of tick-borne encephalitis virus (TBEV) and louping-ill virus (LIV). In this study, we aimed to apply different bioinformatic approaches to analyze all available complete genome amino acid sequences to delineate TBFV members at the species level. Results showed that the European subtype of TBEV (TBEV-E) is a distinct species unit. LIV, in turn, should be separated into two species. Additional analysis of TBEV and LIV antigenic determinant diversity also demonstrate that TBEV-E and LIV are significantly different both from each other and from the other TBEV subtypes. The analysis of available literature provided data on other virus phenotypic particularities that supported our hypothesis. So, within the TBEV + LIV paraphyletic group, we offer to assign four species to get a more accurate understanding of the TBFV interspecies structure according to the modern monophyletic conception.

Ключевые слова

TBFV, Species delimitation, Genomics, Phylogenetics

Название журнала

Molecular Phylogenetics and Evolution

URL

https://www.sciencedirect.com/science/article/abs/pii/S1055790322000240?via%3Dihub

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https://repository.kpfu.ru/?p_id=263121

Полная запись метаданных

Поле DC	Значение	Язык
dc.contributor.author	Ткачев Сергей Евгеньевич	ru_RU
dc.date.accessioned	2022-01-01T00:00:00Z	ru_RU
dc.date.available	2022-01-01T00:00:00Z	ru_RU
dc.date.issued	2022	ru_RU
dc.identifier.citation	Bondaryuk et al., 2022. Delimitation of the tick-borne flaviviruses. Resolving the tick-borne encephalitis virus and louping-ill virus paraphyletic taxa // Molecular Phylogenetics and Evolution, ISSN: 1055-7903, Vol: 169, Page: 107411	ru_RU
dc.identifier.uri	https://repository.kpfu.ru/?p_id=263121	ru_RU
dc.description.abstract	Molecular Phylogenetics and Evolution	ru_RU
dc.description.abstract	he tick-borne flavivirus (TBFV) group contains at least 12 members where five of them are important pathogens of humans inducing diseases with varying severity (from mild fever forms to acute encephalitis). The taxonomy structure of TBFV is not fully clarified at present. In particular, there is a number of paraphyletic issues of tick-borne encephalitis virus (TBEV) and louping-ill virus (LIV). In this study, we aimed to apply different bioinformatic approaches to analyze all available complete genome amino acid sequences to delineate TBFV members at the species level. Results showed that the European subtype of TBEV (TBEV-E) is a distinct species unit. LIV, in turn, should be separated into two species. Additional analysis of TBEV and LIV antigenic determinant diversity also demonstrate that TBEV-E and LIV are significantly different both from each other and from the other TBEV subtypes. The analysis of available literature provided data on other virus phenotypic particularities that supported our hypothesis. So, within the TBEV + LIV paraphyletic group, we offer to assign four species to get a more accurate understanding of the TBFV interspecies structure according to the modern monophyletic conception.	ru_RU
dc.language.iso	ru	ru_RU
dc.subject	TBFV	ru_RU
dc.subject	Species delimitation	ru_RU
dc.subject	Genomics	ru_RU
dc.subject	Phylogenetics	ru_RU
dc.title	Delimitation of the tick-borne flaviviruses. Resolving the tick-borne encephalitis virus and louping-ill virus paraphyletic taxa	ru_RU
dc.type	Статьи в зарубежных журналах и сборниках	ru_RU